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Main paper

Authors

Tuuli Lappalainen1,2,3, Michael Sammeth4,5, Marc R Friedlander5,6, Peter AC 't Hoen7, Jean Monlong5, Manuel A Rivas8, Mar Gonzalez-Porta9, Natalja Kurbatova9, Thasso Griebel4, Pedro G Ferreira5,6, Matthias Barann10, Thomas Wieland11, Liliana Greger9, Maarten van Iterson7, Jonas Almlof12, Paolo Ribeca4, Irina Pulyakhina7, Daniela Esser10, Thomas Giger1, Andrew Tikhonov9, Marc Sultan13, Gabrielle Bertier5,6, Daniel G MacArthur14,15, Monkol Lek14,15, Esther Lizano5,6, Henk PJ Buermans7,16, Ismael Padioleau1,2,3, Thomas Schwarzmayr11, Olof Karlberg12, Halit Ongen1,2,3, Sergi Beltran5,6, Marta Gut4, Katja Kahlem4, Vyacheslav Amstislavskiy13, Matti Pirinen8, Stephen B Montgomery1, Peter Donnelly8, Mark I McCarthy8,17, Paul Flicek9, Tim M Strom11,18, The Geuvadis Consortium, Hans Lehrach13,19, Stefan Schreiber10, Ralf Sudbrak13,19, Angel Carracedo20, Stylianos E Antonarakis1,2, Robert Hasler10, Ann-Christine Syvanen12, Gert-Jan van Ommen7, Alvis Brazma9, Thomas Meitinger11,18, Philip Rosenstiel10, Roderic Guigo5,6, Ivo G Gut4, Xavier Estivill5,6, Emmanouil T Dermitzakis1,2,3

  • Corresponding: Lappalainen, Dermitzakis
  • Equal contribution: Sammeth, Friedlander, 't Hoen, Monlong, Rivas

Affiliations

1 Department of Genetic Medicine and Development, University of Geneva Medical School, 1211 Geneva, Switzerland
2 Institute for Genetics and Genomics in Geneva (1G3), University of Geneva, 1211 Geneva, Switzerland
3 Swiss Institute of Bioinformatics, 1211 Geneva, Switzerland
4 Centro Nacional de Analisis Genomico, 08028 Barcelona, Spain
5 Center for Genomic Regulation (CRG, 08003 Barcelona, Spain
6 Pompeu Fabra University (UPF, 08003 Barcelona, Spain
7 Department for Human and Clinical Genetics, Leiden University Medical Center, 2300 RC Leiden, the Netherlands
8 Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, United Kingdon
9 European Bioinformatics Institute, EMBL-EBI, Hinxton, United Kingdom
10 Institute of Clinical Molecular Biology, Christian-Albrechts-University Kiel, D-24105 Kiel, Germany
11 Institute of Human Genetics, Helmholtz Zentrum München, 85764 Neuherberg, Germany
12 Department of Medical Sciences, Molecular Medicine and Science for Life Laboratory, Uppsala University, 751 85 Uppsala, Sweden
13 Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany
14 Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA 02114, USA
15 Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge MA 02142, USA
16 Leiden Genome Technology Center, 2300 RC Leiden, the Netherlands
17 Oxford Centre for DIabetes Endocrinology and Metabolism, University of Oxford, Oxford OX3 7BN, United Kingdom
18 Institute of Human Genetics, Technische Universitat Munchen, 81675 Munich, Germany
19 Dahlem Centre for Genome Research and Medical Systems Biology, 14195 Berlin, Germany
20 Fundacion Publica Galega de Medicina Xenomica SERGAS, Genomic Medicine Group CIBERER, Universidade de Santiago de Compostela, Santiago de Compostela, Spain


Acknowledgements

Emilie Falconnet, Luciana Romano, Alexandra Planchon, Deborah Bielsen, Alisa Yurovsky, Alfonso Buil, Julies Bryois, Alexandra Nica, Johan Rung, Nikolay Kolesnikov, Asier Roa, Eugene Bragin, Simon Brent, Justo Gonzalez, Marta Morell, Anna Puig, Emilio Palumbo, Marina Ventayol Garcia, Jeroen F.J. Laros, Julie Blanc, Rahnehild Birkelund, Gloria Plaja, Matt Ingham, Jordi Camps, Monica Bayes, Lidia Agueda, Anais Gouin, Marie-Laure Yaspo, Elisabeth Graf, Anett Walther, Carola Fischer, Sandy Loesecke, Bianca Schmick, Daniela Balzereit, Simon Dökel, Matthias Linser, Alexander Kovacsovics, Melanie Friskovec, Catharina von der Lancken, Melanie Schlapkohl, Anita Dietsch, Markus Schilhabel, the SNP&SEQ Technology Platform in Uppsala, Sascha Sauer (Max Plank Institute for Human Genetics (MPIMG, Berlin, Germany) for ESGI (European Sequencing and Genotyping Infrastructure) coordination, the Vital-IT high-performance computing center of the SIB Swiss Institute of Bioinformatics, Bernadette Goldstein and others at the Coriell Institute, and James Cooper, Edward Burnett, Karen Ball and others at the European Collection of Cell Cultures (ECACC) and the 1000 Genomes Consortium.

Funding

This project was funded by the European Commission 7th Framework Program, Project N. 261123 (GEUVADIS), as well as The Swiss National Science Foundation 31003A_130342 and 127375, the Louis Jeantet Foundation, NIH-NIMH MH090941, ERC 249968 grant, The Swedish Research Council (90559401), the Knut and Alice Wallenberg Foundation (2011.0073), the DFG Cluster of Excellence Inflammation at Interfaces, the INTERREG4A project HIT-ID, the European Community's Seventh Framework Programme (FP7/2007-2013), ENGAGE project, grant agreement HEALTH-F4-2007-201413, the Centre for Medical Systems Biology within the framework of The Netherlands Genomics Initiative (NGI)/Netherlands Organisation for Scientific Research (NWO), Spanish Plan Nacional funding SAF2008-¬00357 (NOVADIS), the Generalitat de Catalunya funding AGAUR 2009 SGR-1502, the Ministry of Economy and Competitiveness funding to CLL-Consortium project, ESGI – European Commission Seventh Framework Programme (FP7/2007-2013) under grant agreement no. 262055, Academy of Finland, Emil Aaltonen Foundation, EMBO long-term fellowship ALTF 225-2011, European Community’s FP7 75 CAGEKID (grant agreement 241669), FIS PS09/02368, and the German Ministry of Education and Research (01GR0802, 01GM0867, 01GR0804).


The indexed Geuvadis Consortium author in other papers

  • Main paper authors except for external collaborators: Tuuli Lappalainen1,2,3, Michael Sammeth4,5, Marc R Friedlander5,6, Peter AC 't Hoen7, Jean Monlong5, Mar Gonzalez-Porta9, Natalja Kurbatova9, Thasso Griebel4, Pedro G Ferreira5,6, Matthias Barann10, Thomas Wieland11, Liliana Greger9, Maarten van Iterson7, Jonas Almlof12, Paolo Ribeca4, Irina Pulyakhina7, Daniela Esser10, Thomas Giger1, Andrew Tikhonov9, Marc Sultan13, Gabrielle Bertier5,6, Esther Lizano5,6, Henk PJ Buermans7,16, Ismael Padioleau1,2,3, Thomas Schwarzmayr11, Olof Karlberg12, Halit Ongen1,2,3, Sergi Beltran5,6, Marta Gut4, Katja Kahlem4, Vyacheslav Amstislavskiy13, Stephen B Montgomery1, Tim M Strom11,18, Hans Lehrach13,19, Stefan Schreiber10, Ralf Sudbrak13,19, Angel Carracedo20, Stylianos E Antonarakis1,2, Robert Hasler10, Ann-Christine Syvanen12, Gert-Jan van Ommen7, Alvis Brazma9, Thomas Meitinger11,18, Philip Rosenstiel10, Roderic Guigo5,6, Ivo G Gut4, Xavier Estivill5,6, Emmanouil T Dermitzakis1,2,3
  • TBA regarding other Geuvadis PIs

Acknowledgements in presentations

Inofficial list by Tuuli - this can be modified, but if you are presenting work based on Geuvadis, it would be good to name people instead of just acknowledging the consortium.

  • University of Geneva
    • Tuuli Lappalainen
    • Thomas Giger
    • Ismael Padioleau
    • Halit Ongen
    • Stephen B Montgomery
    • Stylianos E Antonarakis
    • Emmanouil T Dermitzakis
  • Center for Genomic Regulation
    • Marc R Friedlander
    • Jean Monlong
    • Pedro G Ferreira
    • Esther Lizano
    • Gabrielle Bertier
    • Sergi Beltran
    • Roderic Guigo
    • Xavier Estivill
  • Centro Nacional de Analisis Genomico
    • Michael Sammeth
    • Thasso Griebel
    • Paolo Ribeca
    • Marta Gut
    • Katja Kahlem
    • Ivo G Gut
  • University of Leiden
    • Peter AC 't Hoen
    • Irina Pulyakhina
    • Maarten van Iterson
    • Henk PJ Buermans
    • Gert-Jan van Ommen
  • European Bioinformatics Institute
    • Mar Gonzalez-Porta
    • Natalja Kurbatova
    • Liliana Greger
    • Andrew Tikhonov
    • Paul Flicek
    • Alvis Brazma
  • Christian-Albrechts-University Kiel
    • Matthias Barann
    • Daniela Esser
    • Stefan Schreiber
    • Robert Hasler
    • Philip Rosenstiel
  • Technische Universitat Munchen
    • Thomas Wieland
    • Thomas Schwarzmayr
    • Tim M Strom
    • Thomas Meitinger
  • University of Uppsala
    • Jonas Almlof
    • Olof Karlberg
    • Ann-Christine Syvanen
  • Max Planck Institute for Molecular Genetics
    • Marc Sultan
    • Vyacheslav Amstislavskiy
    • Hans Lehrach
    • Ralf Sudbrak
  • Universidade de Santiago de Compostela
    • Angel Carracedo
  • University of Oxford
    • Manuel A Rivas
    • Matti Pirinen
    • Peter Donnelly
    • Mark I McCarthy
  • Massachusetts General Hospital
    • Daniel G MacArthur
    • Monkol Lek
  • The Geuvadis Consortium
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